Publications

Single-cell transcriptome analysis reveals dynamic changes in lncRNA expression during reprogramming.
Kim DH, Marinov GK, Pepke S, Singer ZS, He P, Williams B, Schroth GP, Elowitz MB, Wold BJ.
Cell Stem Cell. 2015 Jan 8;16(1):88-101. doi: 10.1016/j.stem.2014.11.005.
PMID: 25575081

X-chromosome epigenetic reprogramming in pluripotent stem cells via noncoding genes.
Kim DH, Jeon Y, Anguera MC, Lee JT.
Semin Cell Dev Biol. 2011 Jun;22(4):336-42. doi: 10.1016/j.semcdb.2011.02.025. Review.
PMID: 21376830

Transcriptional gene silencing using small RNAs.
Kim DH, Rossi JJ.
Methods Mol Biol. 2009;555:119-25. doi: 10.1007/978-1-60327-295-7_9.
PMID: 19495692

Overview of gene silencing by RNA interference.
Kim DH, Rossi JJ.
Curr Protoc Nucleic Acid Chem. 2009 Mar;Chapter 16:Unit 16.1. doi: 10.1002/0471142700.nc1601s36.
PMID: 19319858

MicroRNA-directed transcriptional gene silencing in mammalian cells. 
Kim DH, Saetrom P, Snøve O Jr, Rossi JJ.
Proc Natl Acad Sci U S A. 2008 Oct 21;105(42):16230-5. doi: 10.1073/pnas.0808830105.
PMID: 18852463

Functional and intracellular localization properties of U6 promoter-expressed siRNAs, shRNAs, and chimeric VA1 shRNAs in mammalian cells.
Lee NS, Kim DH, Alluin J, Robbins M, Gu S, Li H, Kim J, Salvaterra PM, Rossi JJ.
RNA. 2008 Sep;14(9):1823-33. doi: 10.1261/rna.1014008.
PMID: 18697923

RNAi mechanisms and applications.
Kim D, Rossi J.
Biotechniques. 2008 Apr;44(5):613-6. doi: 10.2144/000112792. Review.
PMID: 18474035

Promoter-associated RNA is required for RNA-directed transcriptional gene silencing in human cells.
Han J, Kim D, Morris KV.
Proc Natl Acad Sci U S A. 2007 Jul 24;104(30):12422-7.
PMID: 17640892

Strategies for silencing human disease using RNA interference.
Kim DH, Rossi JJ.
Nat Rev Genet. 2007 Mar;8(3):173-84. Review.
PMID: 17304245

Argonaute-1 directs siRNA-mediated transcriptional gene silencing in human cells.
Kim DH, Villeneuve LM, Morris KV, Rossi JJ.
Nat Struct Mol Biol. 2006 Sep;13(9):793-7.
PMID: 16936726

Differentiation of naive cord-blood T cells into CD19-specific cytolytic effectors for posttransplantation adoptive immunotherapy.
Serrano LM, Pfeiffer T, Olivares S, Numbenjapon T, Bennitt J, Kim D, Smith D, McNamara G, Al-Kadhimi Z, Rosenthal J, Forman SJ, Jensen MC, Cooper LJ.
Blood. 2006 Apr 1;107(7):2643-52.
PMID: 16352804